Assay name
MM_ESR1_1989919 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Esr1
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Esr1
Species
Mus musculus
Main target
ENSMUST00000067086
Exons numbers
3-4
Ensembl exons ids
ENSMUSE00001225544;ENSMUSE00001308368
Amplicon start
785
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000067086
Protein coding
CCDS56678
NM_007956
Chr.10: 4612021 - 5003761
ENSMUST00000105588
Protein coding
NM_001302533
Chr.10: 4710155 - 4967336
ENSMUST00000105589
Protein coding
CCDS56678
NM_001302531
Chr.10: 4710155 - 5002024
ENSMUST00000105590
Protein coding
CCDS56678
NM_001302532
Chr.10: 4611989 - 5005614
ENSMUST00000127145
Processed transcript
Chr.10: 4712651 - 4784824
ENSMUST00000138828
Retained intron
Chr.10: 4612013 - 4857509
ENSMUST00000149195
Processed transcript
Chr.10: 4611593 - 4893083