Assay name
MM_SMARCA2_2158048 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Smarca2
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Smarca2
Species
Mus musculus
Main target
ENSMUST00000099537
Exons numbers
30-31
Ensembl exons ids
ENSMUSE00001205845;ENSMUSE00001232756
Amplicon start
4601
Amplicon length
129
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000025862
Protein coding
CCDS29720
NM_011416
Chr.19: 26605052 - 26778321
ENSMUST00000099537
Nonsense mediated decay
Chr.19: 26607270 - 26778273
ENSMUST00000112637
Protein coding
CCDS37945
NM_026003
Chr.19: 26748403 - 26778321
ENSMUST00000175791
Protein coding
Chr.19: 26748251 - 26777476
ENSMUST00000175842
Protein coding
Chr.19: 26749711 - 26774288
ENSMUST00000175953
Protein coding
Chr.19: 26750939 - 26774220
ENSMUST00000176030
Protein coding
Chr.19: 26605119 - 26778275
ENSMUST00000176475
Protein coding
CCDS84428
Chr.19: 26748411 - 26777392
ENSMUST00000176698
Protein coding
Chr.19: 26748423 - 26777383
ENSMUST00000176731
Nonsense mediated decay
Chr.19: 26710548 - 26778321
ENSMUST00000176769
Protein coding
Chr.19: 26605050 - 26778275
ENSMUST00000177116
Processed transcript
Chr.19: 26753600 - 26777651
ENSMUST00000177252
Protein coding
Chr.19: 26748427 - 26776173
ENSMUST00000177484
Processed transcript
Chr.19: 26770491 - 26777432
ENSMUST00000207054
Protein coding
Chr.19: 26748406 - 26778322
ENSMUST00000207118
Protein coding
Chr.19: 26748399 - 26776133
ENSMUST00000207226
Processed transcript
Chr.19: 26715884 - 26774220
ENSMUST00000207418
Processed transcript
Chr.19: 26745209 - 26774221
ENSMUST00000207535
Nonsense mediated decay
Chr.19: 26751936 - 26774260
ENSMUST00000207812
Protein coding
Chr.19: 26748189 - 26774254
ENSMUST00000207832
Protein coding
Chr.19: 26748425 - 26776135
ENSMUST00000207944
Processed transcript
Chr.19: 26729999 - 26774221
ENSMUST00000208027
Protein coding
Chr.19: 26748532 - 26776181
ENSMUST00000208091
Protein coding
Chr.19: 26750318 - 26777381
ENSMUST00000208186
Protein coding
Chr.19: 26748443 - 26776127
ENSMUST00000208226
Nonsense mediated decay
Chr.19: 26749822 - 26776177
ENSMUST00000208541
Nonsense mediated decay
Chr.19: 26748406 - 26777491
ENSMUST00000208589
Protein coding
CCDS37945
Chr.19: 26748408 - 26777549
ENSMUST00000208705
Protein coding
Chr.19: 26747600 - 26774231
ENSMUST00000208712
Protein coding
Chr.19: 26748443 - 26774281
ENSMUST00000208751
Protein coding
CCDS37945
Chr.19: 26747603 - 26778275
ENSMUST00000208915
Nonsense mediated decay
Chr.19: 26748403 - 26778273
ENSMUST00000209085
Protein coding
CCDS84428
Chr.19: 26748402 - 26778275